I went looking at the calibration settings per your advice. It looks to be the base tune I was using was setup for the standard 2.5 Map/Baro Sensor. The MSPNP2 from diyautotune is upgraded to the MapDaddy 4 Bar Sensor making my calibration very WRONG. I plugged the computer in and the MAP was reading 66 with just the key on. I changed the calibration to the MapDaddy (MPXH6400) for both Map and Baro, set the Barometric Correction to both 0 and the Curve to 100%, and set the Barometric Correction to "Two Independent Sensors" per the MapDaddy instructions.
Now that I did this I updated the tune on the computer, and turned the key on. It now reads 97.2, which is HUGE. Time to start all over again tuning since my VE Table is all wrong.