The only thing you have to be considerate of w/ the increased stroke of a 351 is the chamber size. What is the chamber size of the GT 40 head? In the history of the windsor's highest compression, a 69cc head yielded a CR of 10.7:1.
I'd imagine that a 78 windsor probably has a dished piston deep enough to eat cereal out of, so you'll want the smallest possible chamber you can get to yield a target CR of 9-9.5:1.