seems like I heard that for carb intakes because the fuel and air travel through the intake together, so you want it to tumble around a bit and get mixed together. In an EFI manifold, the fuel isn't introduced until right where it meets the heads. I would think smoother is better for airflow.
Also, I don't think the smooth walls would have a great effect on velocity(aside from turbulent vs. laminar airflow; that could be a bigger difference than I thought), that has more to do with the actual size of the runners, yes?