I like that article. It doesn't go into too much detail about the wiring of the "I" terminal if you are not using the alternator lamp. In some sites I've seen where it recommends to use an in-line 560 ohm resistor. Some don't. I put one in mine, but never tried to see what effect of running without one would be.
If you are wiring a battery in the trunk, the "A" terminal or "Sensing wire" is ideal for that apllication because of the possible voltage drop through the long charge wire.
The MAD article doesn't mention the use of the "Megafuse" but it does say to use Fuseable Links. From what I can remember, they are usually 2 gage sizes smaller than the wire they are protecting. For instance, a 6 gauge wire would have a 10 gauge fuselink.