I did the same thing about two weeks ago, except only one of my bolts broke. I had to take my intake manifold off (which ultimately I found was cracked) to get the bolt out. Well, there was no way that the bolt I broke off was coming out. I tried absolutely everything. I had to drill mine out and re-tap it ... big time pain in the ass. Hopefully yours broke higher up on the bolt than mine. Mine was broken flush with the top of the head and basically was stuck in there something fierce.
As for taking your intake manifold off, it is not very difficult at all. It is very time consuming though, especially if it is your first time (it was mine). Some quick tips are: If you have a digital camera, take pics as you go. Get a bunch of ziploc bags and label them for the bolts. You do not have to take the plentum and throttle body off if you are not planning to replace the intake. You can just unhook all that connects them. Be sure to clean the threads on all the bolts you take out before you reinstall them and make sure that you torque everything to the right specs.
Someone has a 'step-by-step' in their sig ... I'm pretty sure it's DAWG ... maybe he'll chime in or someone else will with a tutorial.