You mentioned something about some shorted wires on some other plugs, that may have something to do with the problem, the ground that goes to pin 46 on the ecu also goes to several other sensors. It goes to the tps sensor (obviously), EGR position sensor, coolant temp, air charge temp, BAP, the self test connector, and a couple other switches/sensors, try checking the wire to ground in a few other sensors and see if you have the same thing there. If you don't have one i'd grab a haynes manual and trace the wires out. it was very helpful for me
There is a thread somewhere around here that has pictures of several different configurations of the O2 harness. if nothing was changed on yours it shouldn't be an issue but but if there is any chance it has been changed you may want to look into it because Ford had different harnesses for different years and for different trannies.