The A9L for 5 speed Is drop in swap for a A3M
Using an unmodified Auto Trans O2 sensor harness with a 5 speed computer will fry the trace inside the computer for pin 46..
Computer & interchange information for 5.0 Mustang
Revised 16-Oct-2011 to add O2 sensor harness warnings
The Mass Air computers from 89-93 are interchangeable with a few exceptions. Just be sure you use the MAF & MAF sensor from the same series computer. The auto transmission computers use a different start circuit than the manual computers. You can use an auto trans computer in a 5 speed car with no problems or changes. I have done it in my original 89 Mustang GT, and I know it works OK. I would recommend avoiding using a 5 speed computer in an auto trans car due to the possibility of damaging the computer’ internal signal ground circuitry.
The odd duck is the 93 Cobra computer, labeled X3Z which is internally calibrated for 24 lb injectors. Use the MAF & MAF sensor from the X3Z computer to avoid problems with the computer's internal calibration. Try and avoid the 93 Cobra computer if you can.
Some cautions about O2 Sensor harnesses need to be observed to avoid damage to the computer.
Only run a 5 speed trans O2 harness with an A9L. Do not run an Auto O2 sensor harness with an A9L. Doing so will damage the computer’s internal signal ground.
Only run an Auto trans O2 sensor harness with an A9P in a car that has an Auto trans. Using a 5 speed trans O2 sensor harness with an Auto trans will cause no crank problems.
See
http://forums.corral.net/forums/general-mustang-tech/1094179-oxygen-sensor- harnesses-manual-auto-differences-year-differences.html for more O2 sensor wiring harness info
If you have a damaged computer with signal ground problems,
See http://www.stangnet.com/mustang-forums/749974-computer-issue.html#post7490537 for Joel5.0’s fix to the computer internal signal ground.
All the following are mass air unless they say Speed Density
8LD - MANUAL 88 5.0L Mustang Mass Air - California
8LF - Auto 88 5.0L Mustang Mass Air- California
8LG - Auto 88 5.0L Mustang Mass Air- California
A9L - 89-93 5.0L Mustang 5-spd Mass Air
A3M - 93 5.0L Mustang 5-spd Mass Air
A3M1 - 93 5.0L Mustang 5-spd Mass Air
X3Z - 93 5.0L Cobra 5-spd Mass Air internally calibrated for 24 lb injector
A9P - 89-93 5.0L Mustang Auto Mass Air
A9S - 88 5.0L Mustang California Mass Air
C3W - 89-93 5.0L Mustang Auto
DA1 - 87 5.0L Mustang 5-spd Speed Density
J4J1 - 94-95 5.0L SVT Cobra 5-spd
T4M0 - 94-95 5.0L GT Vert 5-spd
U4P0 - 94-95 5.0L GT Auto
W4H0 - 94-95 5.0L GT
ZA0 - 95 Cobra R
D9S - 88 Lincoln LSC Speed Density
Computer will not go into diagnostic mode on 91-95 model 5.0 Mustangs
Revised Dec 23 2107
1.) To clarify signal ground connections on the engine mounted fuel injector wiring harness and add diagram for the engine mounted fuel injector wiring harness
2.) To add warning about using an automatic transmission O2 sensor wiring harness with a A9L manual shift transmission computer.
How it is supposed to work:
The grey/red wire (pin 46) is signal ground for the computer. It provides a dedicated ground for the EGR, Baro, ACT, ECT, & TPS sensors as well as the ground to put the computer into self-test mode. As long as you are successful dumping the codes by using the gray/red wire on the diagnostic connector for the ground when dumping, the computer’s internal ground on pin 46 is good.
If this ground is bad, none of the sensors mentioned will work properly. That will severely affect the car's performance. You will have hard starting, low power and drivability problems. Since it is a dedicated ground, it passes through the computer on its way to the computer main power ground that terminates at the battery pigtail ground. It should read less than 1 ohm when measured from anyplace on the engine harness with the battery pigtail ground as the other reference point for the ohmmeter probe.
Engine mounted fuel injector wiring harness sensors for a 5.0 mustang
What sometimes happens is that the test connector grey/red wire gets jumpered to power which either burns up the wiring or burns the trace off the pc board inside the computer. That trace connects pins 46 to pins 40 & 60.
OR
If an O2 sensor harness from an automatic transmission Mustang is used with an A9L manual shift transmission computer. The 12 volts from the automatic transmission starter circuit will damage the A9L computer.
The STI (Self Test Input) is jumpered to ground to put the computer into test mode. Jumpering it to power can produce unknown results, including damage to the computer. The ohm test simply verifies that there are no breaks in the wiring between the test connector and the computer input.
How to test the wiring :
With the power off, measure the resistance between the computer test ground (grey/red wire) on the self- test connector and battery ground. You should see less than 1 ohm.
If that check fails, remove the passenger side kick panel and disconnect the computer connector. There is a 10 MM bolt that holds it in place. Measure the resistance between the grey/red wire and pin 46 on the computer wiring connector: it should be less than 1 ohm. More than 1 ohm is a wiring problem. If it reads 1 ohm or less, then the computer is suspect. On the computer, measure the resistance between pin 46 and pins 40 & 60: it should be less than 1 ohm. More than that and the computer’s internal ground has failed, and the computer needs to be repaired or replaced.
While you have the computer connector disconnected from the computer, turn the ignition switch to the Start position and look for 12 volts on pin 46 of the computer wiring harness. If you see 12 volts then you have an automatic transmission O2 sensor harness. That will damage the A9L manual shift transmission computer.
See http://www.stangnet.com/mustang-forums/749974-computer-issue.html#post7490537 for Joel5.0’s fix for the computer internal signal ground.
If the first ground check was good, there are other wires to check. Measure the resistance between the STI computer self-test connector (red/white wire) and pin 48 on the computer main connector: it should be less than 1.5 ohms. More than 1 ohms is a wiring problem
The following is a view from the computer side of the computer wiring connector: it is for an A9L, A9P computer.
Diagram courtesy of Tmoss & Stang&2birds
Check out the diagram and notice all the places the grey/red wire goes. Almost every sensor on the engine except the MAF is connected to it.
91-93 5.0 Mustangs
Complete computer, actuator & sensor wiring diagram for 94-95 Mass Air Mustangs
See the graphic for the 10 pin connector circuit layout.
See the following website for some help from Tmoss (diagram designer) & Stang&2Birds
(website host) for help on 88-95 wiring
http://www.veryuseful.com/mustang/tech/engine