Anyone running SCT tune with JET MAF?

The guys from Bama called me today about my tune for my 97 GT and said that they dont have enough research to tune my car with the JET MAF and to put the stock one back on. Is anyone running this setup? I doubt it will hurt anything if I just keep the JET MAF on and not be tuned for it. Just wanna see if anyone has had this probem
 
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The guys from Bama called me today about my tune for my 97 GT and said that they dont have enough research to tune my car with the JET MAF and to put the stock one back on. Is anyone running this setup? I doubt it will hurt anything if I just keep the JET MAF on and not be tuned for it. Just wanna see if anyone has had this probem

I can tune it