Well that narrows it down a little further. If when the car is warm, and both WOT and normal cruise seem to be fine, then your MAF/ECT/IAT/O2's are fine.
So it has to be something to do w/ temperature. Hmm.......very strange.
The only thing I could think of is the ECT sensor. But you replaced that. I can't think of anything else that is temperature dependant.
Maybe something to do with the distributor. PIP module, or something. That is the only thing that I can think of that is subject to heat that could cause the problem. I mean, the dist. shouldn't be affected by heat, but it is one of the few things that runs through the engine block.
Try disconnecting the battery, let it sit for a few minutes, then reconnect, and drive for 20 miles. If the computer can detect a problem, it might need a fresh start to do so. Just another thought.
Scott