I'm gonna work with my mechanic buddy to pop the trans off and double check everything. I just wasn't sure it could be trans if I'm sitting still and clutch pushed in. And I thought a out of balance flywheel would make it feel like the car was coming apart. The higher rpms 4500/5000 almost makes it feel like it smooths out cause it gets vibrating so fast.I agree. I'd lean towards something clutch related isn't right.
Especially if this problem only started after those parts were replaced.