Exhuast systems on a turbo kit can only have a little bit of back pressure. Back pressure in the exhuast(after turbo) can be bad. It can cause a turbo to spool slower. If the exhuast can't cross the turbo fast enough, it can't spin the turbo fast enough. If it backs up there, it backs up in the headers and crossover and over whelms the wastegate. You can over boost your motor, which can be very bad.
Also, you are trying to make a ton of power with one pipe, so it has to be bigger. Lots of guys run 3in into a splitter and 2.5 back like a normal N/A car.