i wouldn't see why it wouldn't work with your setup. guy running power adders have been using box uppers for some time now. especially turbo guys
just somethings i've notice:
a. i haven't seen anyone use that intake in particular
b. IMO that lower seems a little taller than our typical lower intakes either stock or aftermarket. could be just the picture, but some thing to get answers to will your current piping bolt up with out moddification? i know you don't have a stock hood but if you did would it fit under one?
your best bet to get more info would be to call cartech direct.