The pistons are not necessarily weak. Hypereutectic pistons have been used on many Ford engines since the early '90's...even the modulars. Alternative Auto Performance used a '92 LX "mule" with a stock '96 DOHC modular (with hypereutectic pistons) and nailed it with 25-30psi...putting out roughly 650rwhp. It eventually blew the block apart after several 1/4 mile runs, but upon autopsy, it was found that the pistons literally ripped apart from high RPM (over 7000), not from air/fuel issues.
The thing with any engine with mods, especially those running boost, is to closely monitor and tune for a "safe" air/fuel ratio...sometimes that means custom tuning. If you are just planning a head-intake-cam combo, your '93 should do fine. A suggestion, though, is to check your compression across the cylinders to make sure you are going to get a good ring seal. No sense in modding to top end if your bottom end needs attention first.