Paul, EGR is inactive at idle and WOT, so technically it shouldn't effect the idle AFAIK. Somebody correct me if I'm wrong.
Like JT said, the only real way to delete the EGR, is to delete it from the PCM as well. Custom chip, PMS, twEECer, they will all do it.
You might get some part throttle pinging due to no EGR, some do, some don't. If you do delete it, be prepared to run higher octane fuel in case you get pinging.