Man, this is a can of worms question. Every time you change something on the intake side, you can affect how the car idles. I did this mod, and had no idle issues until I added the C&L MAF. Then, things went to ****. It's now removed.
I know when I bought my BBK TB, they tell you that it is factory set and you should not touch the idle screw. I always thought that was crazy. How in God's name can they set my idle from 3,000 miles away?
Bottom line, you may need to adjust your idle. The car should idle around 600 - 700 rpms. And if you have a current problem with your IAC but don't know it, the plenum and new TB may bring it out. I think cleaning the IAC when doing this change is a good idea as you will have it out anyway.
Slap the new parts on, reset the computer, and see what happens. If your idle bogs too much, or is "hunting" (up and down a lot), you will need to reset your base idle.
To do this, remove the wire harness on the IAC. Then, start the car. The car should just barely idle with the harness removed. It is dies, then the base idle is too low. Adjust the screw and restart etc..
Make sure to connect all your hoses properly too.
Good luck!